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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11062451 chr12:3110115 G/A UTP15 chr5:72861268-72879202:+ 0.4 6.03 3.95E-9 Box Plot
BLCA rs11071764 chr15:63995137 T/C VCX chrX:7810303-7812184:+ 0.35 6.16 1.82E-9 Box Plot
BLCA rs11073089 chr15:35583032 C/T RTF1 chr15:41700606-41775761:+ 0.77 6.12 2.28E-9 Box Plot
BLCA rs1107715 chr4:186266309 C/T C4orf41 chr4:184580446-184634744:+ -0.63 -6.49 2.73E-10 Box Plot
BLCA rs1107715 chr4:186266309 C/T CLCN3 chr4:170533784-170644824:+ -0.42 -6.08 2.91E-9 Box Plot
BLCA rs1107715 chr4:186266309 C/T RWDD4A chr4:184560789-184580331:- -0.73 -6.24 1.17E-9 Box Plot
BLCA rs11081995 chr18:34871434 A/G ELP2 chr18:33709407-33760519:+ 0.7 6.71 7.04E-11 Box Plot
BLCA rs11081995 chr18:34871434 A/G HDHD2 chr18:44633774-44676891:- 0.59 6.12 2.35E-9 Box Plot
BLCA rs11081995 chr18:34871434 A/G LOC400657 chr18:72259012-72265071:- 0.61 6.22 1.27E-9 Box Plot
BLCA rs11081995 chr18:34871434 A/G PIK3C3 chr18:39535171-39667794:+ 0.6 6.08 2.9E-9 Box Plot
BLCA rs11081995 chr18:34871434 A/G SMAD4 chr18:48554764-48611415:+ 0.58 6.14 2.04E-9 Box Plot
BLCA rs11081995 chr18:34871434 A/G TXNL1 chr18:54264439-54318831:- 0.63 6.01 4.27E-9 Box Plot
BLCA rs11081995 chr18:34871434 A/G ZNF24 chr18:32912176-32925446:- 0.64 7.19 3.39E-12 Box Plot
BLCA rs11081995 chr18:34871434 A/G ZNF271 chr18:32870246-32890730:+ 0.67 6.06 3.28E-9 Box Plot
BLCA rs11100776 chr4:139014474 C/T TRPV1 chr17:3468738-3512705:- 0.29 5.97 5.51E-9 Box Plot